diff --git a/CHANGES.rst b/CHANGES.rst
index dcf9adc95..24e4e7a38 100644
--- a/CHANGES.rst
+++ b/CHANGES.rst
@@ -1,3 +1,10 @@
+Unreleased
+==========
+
+synctl no longer starts the main synapse when using ``-a`` option with workers.
+A new worker file should be added with ``worker_app: synapse.app.homeserver``
+
+
 Changes in synapse v0.26.0 (2018-01-05)
 =======================================
 
diff --git a/synapse/app/synctl.py b/synapse/app/synctl.py
index 3bd7ef7bb..0f0ddfa78 100755
--- a/synapse/app/synctl.py
+++ b/synapse/app/synctl.py
@@ -184,6 +184,9 @@ def main():
         worker_configfiles.append(worker_configfile)
 
     if options.all_processes:
+        # To start the main synapse with -a you need to add a worker file
+        # with worker_app == "synapse.app.homeserver"
+        start_stop_synapse = False
         worker_configdir = options.all_processes
         if not os.path.isdir(worker_configdir):
             write(
@@ -200,11 +203,29 @@ def main():
         with open(worker_configfile) as stream:
             worker_config = yaml.load(stream)
         worker_app = worker_config["worker_app"]
-        worker_pidfile = worker_config["worker_pid_file"]
-        worker_daemonize = worker_config["worker_daemonize"]
-        assert worker_daemonize, "In config %r: expected '%s' to be True" % (
-            worker_configfile, "worker_daemonize")
-        worker_cache_factor = worker_config.get("synctl_cache_factor")
+        if worker_app == "synapse.app.homeserver":
+            # We need to special case all of this to pick up options that may
+            # be set in the main config file or in this worker config file.
+            worker_pidfile = (
+                worker_config.get("pid_file")
+                or pidfile
+            )
+            worker_cache_factor = worker_config.get("synctl_cache_factor") or cache_factor
+            daemonize = worker_config.get("daemonize") or config.get("daemonize")
+            assert daemonize, "Main process must have daemonize set to true"
+
+            # The master process doesn't support using worker_* config.
+            for key in worker_config:
+                if key == "worker_app":  # But we allow worker_app
+                    continue
+                assert not key.startswith("worker_"), \
+                    "Main process cannot use worker_* config"
+        else:
+            worker_pidfile = worker_config["worker_pid_file"]
+            worker_daemonize = worker_config["worker_daemonize"]
+            assert worker_daemonize, "In config %r: expected '%s' to be True" % (
+                worker_configfile, "worker_daemonize")
+            worker_cache_factor = worker_config.get("synctl_cache_factor")
         workers.append(Worker(
             worker_app, worker_configfile, worker_pidfile, worker_cache_factor,
         ))
diff --git a/synapse/config/workers.py b/synapse/config/workers.py
index c5a5a8919..4b6884918 100644
--- a/synapse/config/workers.py
+++ b/synapse/config/workers.py
@@ -23,6 +23,11 @@ class WorkerConfig(Config):
 
     def read_config(self, config):
         self.worker_app = config.get("worker_app")
+
+        # Canonicalise worker_app so that master always has None
+        if self.worker_app == "synapse.app.homeserver":
+            self.worker_app = None
+
         self.worker_listeners = config.get("worker_listeners")
         self.worker_daemonize = config.get("worker_daemonize")
         self.worker_pid_file = config.get("worker_pid_file")