Clean up to arxiv (and move any ml related to the agentic repo) (#8)

Caffee/Dockerfile

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+FROM ubuntu:14.04
+
+RUN apt-get update && apt-get install -y --no-install-recommends \
+        build-essential \
+        cmake \
+        git \
+        wget \
+        libatlas-base-dev \
+        libboost-all-dev \
+        libgflags-dev \
+        libgoogle-glog-dev \
+        libhdf5-serial-dev \
+        libleveldb-dev \
+        liblmdb-dev \
+        libopencv-dev \
+        libprotobuf-dev \
+        libsnappy-dev \
+        protobuf-compiler \
+        python-dev \
+        python-numpy \
+        python-pip \
+        python-scipy && \
+    rm -rf /var/lib/apt/lists/*
+
+ENV CAFFE_ROOT=/opt/caffe
+WORKDIR $CAFFE_ROOT
+
+# FIXME: clone a specific git tag and use ARG instead of ENV once DockerHub supports this.
+ENV CLONE_TAG=master
+
+RUN git clone -b ${CLONE_TAG} --depth 1 https://github.com/BVLC/caffe.git . && \
+    for req in $(cat python/requirements.txt) pydot; do pip install $req; done && \
+    mkdir build && cd build && \
+    cmake -DCPU_ONLY=1 .. && \
+    make -j"$(nproc)"
+
+ENV PYCAFFE_ROOT $CAFFE_ROOT/python
+ENV PYTHONPATH $PYCAFFE_ROOT:$PYTHONPATH
+ENV PATH $CAFFE_ROOT/build/tools:$PYCAFFE_ROOT:$PATH
+RUN echo "$CAFFE_ROOT/build/lib" >> /etc/ld.so.conf.d/caffe.conf && ldconfig
+
+WORKDIR /workspace

Caffee/README.md

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+## caffee deep learning example
+
+<br>
+
+build with:
+
+<br>
+
+```
+docker build -t caffe:cpu .
+```
+
+<br>
+
+test with:
+
+<br>
+
+```
+docker run -ti caffe:cpu bash -c "cd /opt/caffe/build; make runtest"
+```
+
+<br>
+
+play with:
+
+<br>
+
+```
+docker run -ti  --volume=$(pwd):/workspace caffe:cpu
+```