diff --git a/README.md b/README.md index 38f5caf..12a9215 100755 --- a/README.md +++ b/README.md @@ -269,7 +269,7 @@ Inspired by [Awesome Deep Learning](https://github.com/ChristosChristofidis/awes - [Network Science IGERT at the University of California at Santa Barbara (UCSB)](http://networkscience.igert.ucsb.edu/) - Features an [NSF-funded](http://www.igert.org/) graduate programme. - [Networks, Computation, and Social Dynamics Lab](http://www.ncasd.org/) - Headed by Carter T. Butts. Part of the [Center for Networks and Relational Analysis](http://relationalanalysis.org/) (CNRA) at the University of California in Irvine. - [Northeastern University Network Science Institute](http://www.networkscienceinstitute.org/) - Features a PhD in Network Science program. -- [Northeastern University Center for Complex Network Research](http://www.barabasilab.com/) - Led by Albert-László Barabási. +- [Northeastern University Center for Complex Network Research](https://www.northeastern.edu/research/centers/center-for-complex-network-research-ccnr/) - Led by Albert-László Barabási. - [Northeastern University MOBS Lab - Laboratory for the Modeling of Biological and Socio-technical Systems](http://www.mobs-lab.org/) - Led by Alessandro Vespignani. - [Pacific Ecoinformatics and Computational Ecology Lab](http://foodwebs.org/) - Non-profit study group of ecological networks ("food webs"). - [Peter J. Mucha’s Research Group at the University of North Carolina at Chapel Hill](http://mucha.web.unc.edu/networks/). @@ -345,18 +345,18 @@ Inspired by [Awesome Deep Learning](https://github.com/ChristosChristofidis/awes ### Biological, Ecological and Disease Networks 1. [Biological Networks](http://algo.uni-konstanz.de/publications/bbs-bn-13.pdf) (_Handbook of Graph Drawing and Visualization_, 2013). -- [Interactome Networks and Human Disease](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/201103-18_CellRev-InteractomeHumDis/201103-18_CellRev-InteractomeHumDis.pdf) (_Cell_, 2011). +- [Interactome Networks and Human Disease](http://barabasi.com/f/326.pdf) (_Cell_, 2011). - [Network Analysis: An Integrative Approach to the Structure of Psychopathology](http://www.annualreviews.org/doi/full/10.1146/annurev-clinpsy-050212-185608) (_Annual Review of Clinical Psychology_, 2013). -- [Network Biology: Understanding the Cell’s Functional Organization](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/200402-00_NatureRevGen-NetworkBiology/200402-00_NatureRevGen-NetworkBiology.pdf) - Accessible introduction to (cellular) network analysis (_Nature Reviews Genetics_, 2004). -- [Network Medicine: A Network-based Approach to Human Disease](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/201012-18_NatureRev-NetMedicine/201012-18_NatureRev-NetMedicine.pdf) (_Nature Review Genetics_, 2011). +- [Network Biology: Understanding the Cell’s Functional Organization](http://barabasi.com/f/147.pdf) - Accessible introduction to (cellular) network analysis (_Nature Reviews Genetics_, 2004). +- [Network Medicine: A Network-based Approach to Human Disease](http://barabasi.com/f/320.pdf) (_Nature Review Genetics_, 2011). - [Social Networks and the Spread of Infectious Diseases: the AIDS Example](http://www.sciencedirect.com/science/article/pii/0277953685902692) (_Social Networks_, 1985). - [Structure and Dynamics of Molecular Networks: A Novel Paradigm of Drug Discovery. A Comprehensive Review](http://www.sciencedirect.com/science/article/pii/S0163725813000284) - Also includes an impressive list of network analysis software (_Pharmacology & Therapeutics_, 2013). ### Complex Networks -1. [The Architecture of Complexity](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/200708-00_IEEEControlSys-ArchofComplex/200708-00_IEEEControlSys-ArchofComplex.pdf) - From network theory to complexity theory (_IEEE Control Systems Magazine_, 2007). +1. [The Architecture of Complexity](http://barabasi.com/f/226.pdf) - From network theory to complexity theory (_IEEE Control Systems Magazine_, 2007). - [Complex Systems and Networks](http://science.sciencemag.org/content/325/5939) (special issue of _Science_, 2009). -- [Statistical Mechanics of Complex Networks](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/200201-30_RevModernPhys-StatisticalMech/200201-30_RevModernPhys-StatisticalMech.pdf) (_Reviews of Modern Physics_, 2002). +- [Statistical Mechanics of Complex Networks](http://barabasi.com/f/103.pdf) (_Reviews of Modern Physics_, 2002). - [The Structure and Function of Complex Networks](http://epubs.siam.org/doi/abs/10.1137/S003614450342480) (_SIAM Review_, 2003). ### Ethics of Network Analysis @@ -419,7 +419,7 @@ Inspired by [Awesome Deep Learning](https://github.com/ChristosChristofidis/awes - [Network Analysis, Culture, and the Problem of Agency](http://www.ssc.wisc.edu/~emirbaye/Mustafa_Emirbayer/ARTICLES_files/network%20analysis,%20culture,%20and%20the%20problem%20of%20agency.pdf), by Mustafa Emirbayer and Jeff Goodwin (_American Journal of Sociology_, 1994), and [Manifesto for a Relational Sociology](http://www.ssc.wisc.edu/~emirbaye/Mustafa_Emirbayer/ARTICLES_files/manifesto%20for%20a%20relational%20sociology.pdf), by Mustafa Emirbayer (_American Journal of Sociology_, 1997) - Sociological foundations for a science of social ties. - [Network Theory, Plot Analysis](https://sydney.edu.au/intellectual-history/documents/moretti_network_theory_plot_analysis.pdf), by Franco Moretti - Example applications of (fictional) network analysis in literary studies (_New Left Review_, 2011). - [Node Centrality in Weighted Networks: Generalizing Degree and Shortest Paths](http://www.sciencedirect.com/science/article/pii/S0378873310000183), by Tore Opsahl, Filip Agneessens and John Skvoretz - Explores the generalization of network centrality and distance measures to (positively) valued graphs (_Social Networks_, 2010; [companion website](https://toreopsahl.com/tnet/)). -- [Scale-Free Networks](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/200305-01_SciAmer-ScaleFree/200305-01_SciAmer-ScaleFree.pdf), by Albert-László Barabási and Eric Bonabeau - Early, accessible formulation of the “networks are everywhere” argument (_Scientific American_, 2003). +- [Scale-Free Networks](http://barabasi.com/f/124.pdf), by Albert-László Barabási and Eric Bonabeau - Early, accessible formulation of the “networks are everywhere” argument (_Scientific American_, 2003). - [Social Networks and Causal Inference](http://link.springer.com/chapter/10.1007/978-94-007-6094-3_17), by Tyler J. VanderWeele and Weihua An - Reviews the different ways in which network analysis can produce meaningful causal statements, as well as the inherent limits of network analysis for doing so (_[Handbook of Causal Analysis for Social Research](http://link.springer.com/book/10.1007/978-94-007-6094-3)_, 2013). - [The Performativity of Networks](http://kieranhealy.org/files/papers/performativity.pdf), by Kieran Healy - Network analysis meets science studies: social networks, like financial markets, are highly subject to performativity, i.e. the possibility that reality might be altered by its theoretical inquiry (_European Journal of Sociology_, 2015). - [Robust Action and the Rise of the Medici, 1400-1434](http://home.uchicago.edu/~jpadgett/papers/published/robust.pdf), by John F. Padgett and Christopher K. Ansell - Classic analysis of power relations in the Renaissance Florentine state (_American Journal of Sociology_, 1993). @@ -780,9 +780,9 @@ Inspired by [Awesome Deep Learning](https://github.com/ChristosChristofidis/awes 1. [Editing a Normal Science Journal in Social Science](http://bms.revues.org/595) - Reflections on the _Social Networks_ journal by its founding editor. - [The Emergence of Network Science](https://www.cornell.edu/video/emergence-of-network-science) - Video documentary, featuring Steven Strogatz and many others. -- From [Albert-László Barabási’s review articles](http://www.barabasilab.com/pubs-revart.php): - - [Taming Complexity](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/200511-00_TamingComplexity/200511-00_TamingComplexity.pdf). - - [The Network Takeover](http://www.barabasilab.com/pubs/CCNR-ALB_Publications/201112-22_NatPhys-takeover/201112-22_NatPhys-takeover.pdf). +- From [Albert-László Barabási’s review articles](http://barabasi.com/publications/1/review-articles): + - [Taming Complexity](http://barabasi.com/f/182.pdf). + - [The Network Takeover](http://barabasi.com/f/362.pdf). - [The Invasion of the Physicists](http://www.sciencedirect.com/science/article/pii/S0378873304000309) - How “network _science_” came up. - [Isolated Social Networkers](http://crookedtimber.org/2005/05/19/isolated-social-networkers/), [Networks and Netwars](http://bactra.org/weblog/347.html) and [The Inter-Disciplinary Politics of Interdisciplinary Research or, “Hey, That Was My Idea First.”](https://www.cs.unm.edu/~aaron/blog/archives/2005/05/the_interdiscip.htm) - Series of blog posts that predate the advent of “network science” as a buzzword, but that touch upon the same issues as those now being discussed under that heading. - [Predicting Highly Cited Papers](http://arxiv.org/abs/1310.8220) - Prediction of the next highly cited papers in network science.