fixing links, turning many to DOI links

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François Briatte 2023-04-26 23:39:01 +02:00
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README.md
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> Accessible introductions aimed at non-technical audiences.
- _[Connected: The Surprising Power of Our Social Networks and How They Shape Our Lives](http://www.connectedthebook.com/)_, by Nicholas A. Christakis and James H. Fowler (2009).
- _[Linked: The New Science of Networks](http://barabasi.com/book/linked)_, by Albert-László Barabási (2002).
- _[Linked: The New Science of Networks](https://barabasi.com/book/linked)_, by Albert-László Barabási (2002).
- _[Network Literacy: Essential Concepts and Core ideas](https://sites.google.com/a/binghamton.edu/netscied/teaching-learning/network-concepts)_, by the NetSciEd team (c. 2016) - Available in several languages ([paper](https://academic.oup.com/comnet/article-abstract/4/3/457/1745356)).
- _[Nexus. Small Worlds and the Groundbreaking Theory of Networks](http://books.wwnorton.com/books/Nexus/)_, by Mark Buchanan (2003).
- _[Six Degrees: The Science of a Connected Age](http://books.wwnorton.com/books/detail.aspx?ID=7599)_, by Duncan J. Watts (2003).
@ -87,12 +87,12 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
- _[Network Science](http://www.nap.edu/catalog/11516/network-science)_, by the U.S. National Research Council - Full book online (2005).
- _[Network Science: Theory and Practice](http://eu.wiley.com/WileyCDA/WileyTitle/productCd-1118211014.html)_, by Ted G. Lewis (2011).
- _[Networks. An Introduction](http://www-personal.umich.edu/~mejn/networks-an-introduction/)_, by Mark E.J. Newman (2010).
- _[Networks, Crowds, and Markets: Reasoning About a Highly Connected World](http://www.cs.cornell.edu/home/kleinber/networks-book/)_, by David Easley and Jon Kleinberg - Full pre-publication draft ([review](http://bactra.org/reviews/networks-crowds-markets.html); 2010).
- _[Networks, Crowds, and Markets: Reasoning About a Highly Connected World](https://www.cs.cornell.edu/home/kleinber/networks-book/)_, by David Easley and Jon Kleinberg - Full pre-publication draft ([review](http://bactra.org/reviews/networks-crowds-markets.html); 2010).
- _[Réseaux sociaux et structures relationnelles](https://www.puf.com/content/R%C3%A9seaux_sociaux_et_structures_relationnelles)_, by Emmanuel Lazega, in French (2014).
- _[The SAGE Handbook of Social Network Analysis](http://www.sagepub.in/books/Book232753/)_, edited by John Scott and Peter J. Carrington (2011).
- _[The SAGE Handbook of Social Network Analysis](https://methods.sagepub.com/book/the-sage-handbook-of-social-network-analysis)_, edited by John Scott and Peter J. Carrington (2011).
- _[Sociologie des réseaux sociaux](http://pierremerckle.fr/2011/02/sociologie-des-reseaux-sociaux/)_, by Pierre Mercklé, in French (2011).
- _[Social and Economic Networks](http://press.princeton.edu/titles/8767.html)_, by Matthew O. Jackson (2008).
- _[Social Network Analysis with Applications](http://eu.wiley.com/WileyCDA/WileyTitle/productCd-1118169476.html)_, by Ian McCulloh, Helen Armstrong and Anthony Johnson (2013).
- _[Social and Economic Networks](https://press.princeton.edu/books/paperback/9780691148205/social-and-economic-networks)_, by Matthew O. Jackson (2008).
- _[Social Network Analysis with Applications](https://www.wiley.com/en-gb/Social+Network+Analysis+with+Applications-p-9781118169476)_, by Ian McCulloh, Helen Armstrong and Anthony Johnson (2013).
- _[Social Networks: An Introduction](https://www.routledge.com/products/9780415458030)_, by Jeroen Bruggeman ([related material](https://sites.google.com/site/introsocnet/); 2008).
- _[Studying Social Networks. A Guide to Empirical Research](http://press.uchicago.edu/ucp/books/book/distributed/S/bo15475096.html)_, by Marina Hennig _et al._ (2013).
- _[Understanding Social Networks. Theories, Concepts, and Findings](https://global.oup.com/academic/product/understanding-social-networks-9780195379471)_, by Charles Kadushin (2012).
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- _[Multilevel Network Analysis for the Social Sciences](https://www.springer.com/fr/book/9783319245188)_, edited by Emmanuel Lazega and Tom A.B. Snijders (2016).
- _[Multimodal Political Networks](https://www.cambridge.org/core/books/multimodal-political-networks/43EE8C192A1B0DCD65B4D9B9A7842128)_, by David Knoke, Mario Diani, James Hollway and Dimitri Christopulos (2021).
- _[Multivariate Network Visualization](https://www.springer.com/us/book/9783319067926)_, edited by Andreas Kerren, Helen C. Purchase and Matthew O. Ward (2014).
- _[Network Analysis in Archaeology](https://global.oup.com/academic/product/network-analysis-in-archaeology-9780199697090)_, edited by Carl Knappett (2013; [review in French](https://journals.openedition.org/nda/2383)).
- _[Network Analysis in Archaeology](https://global.oup.com/academic/product/network-analysis-in-archaeology-9780199697090)_, edited by Carl Knappett (2013; [review in French](https://doi.org/10.4000/nda.2383)).
- _[Network Analysis: Methodological Foundations](https://www.springer.com/fr/book/9783540249795)_, edited by Ulrik Brandes and Thomas Erlebach - Covers network centrality, clustering, blockmodels, spatial networks and more (2005).
- _[Political Networks. The Structural Perspective](http://www.cambridge.org/ar/academic/subjects/sociology/political-sociology/political-networks-structural-perspective)_, by David Knoke (1994).
- _[Social Network Analysis for Ego-Nets: Social Network Analysis for Actor-Centred Networks](https://uk.sagepub.com/en-gb/eur/social-network-analysis-for-ego-nets/book240391)_, by Nick Crossley _et al._ (2015).
- _[Understanding Large Temporal Networks and Spatial Networks](http://eu.wiley.com/WileyCDA/WileyTitle/productCd-0470714522.html)_, by Vladimir Batagelj _et al._ (2014).
- _[Understanding Large Temporal Networks and Spatial Networks](https://www.wiley.com/en-gb/Understanding+Large+Temporal+Networks+and+Spatial+Networks%3A+Exploration%2C+Pattern+Searching%2C+Visualization+and+Network+Evolution-p-9780470714522)_, by Vladimir Batagelj _et al._ (2014).
### Software-specific
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- [igraphdata](https://CRAN.R-project.org/package=igraphdata) - R data-centric package.
- [Interaction Web Database](http://www.ecologia.ib.usp.br/iwdb/) - Ecological species interactions.
- [International Currencies 1890-1910](http://eh.net/database/international-currencies-1890-1910/) - Historical data on the international connections between 45 currencies.
- [KONECT - The Koblenz Network Collection](http://konect.uni-koblenz.de/) - Includes, among other things, networks of collaboration in DBpedia and Wikipedia, GitHub ([companion handbook](http://arxiv.org/abs/1402.5500)).
- [KONECT - The Koblenz Network Collection](http://konect.uni-koblenz.de/) - Includes, among other things, networks of collaboration in DBpedia and Wikipedia, GitHub ([companion handbook](https://arxiv.org/abs/1402.5500)).
- [James H. Fowlers Cosponsorship Network Data Page](http://jhfowler.ucsd.edu/cosponsorship.htm).
- [Linton Freemans Network Data](http://moreno.ss.uci.edu/data.html) - Over 300 datasets of all sorts, in UCINET format.
- [Mangal](http://mangal.io/) - Online platform to analyze, archive and share ecological network data ([preprint](http://biorxiv.org/content/early/2015/02/24/002634), [Python package](https://github.com/mangal-wg/pymangal), [R package](https://github.com/mangal-wg/rmangal)).
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> See also the bibliographies [by Claire Lemercier and Claire Zalc](http://www.quanti.ihmc.ens.fr/Analyse-de-reseaux-bibliographie.html) (section on _études structurales_), [by the Historical Network Research Group](http://historicalnetworkresearch.org/resources/bibliography/), and [by Tom Brughmans](https://archaeologicalnetworks.wordpress.com/network-science-bibliography/).
- [Analyse de réseaux et histoire](https://www.cairn.info/revue-d-histoire-moderne-et-contemporaine-2005-2-page-88.htm), in French (_Revue dhistoire moderne et contemporaine_, 2005).
- [Analyser les réseaux du passé en archéologie et en histoire](https://journals.openedition.org/nda/2300), in French (_Les Nouvelles de lArchéologie_, 2014).
- [Analyse de réseaux et histoire](https://doi.org/10.3917/rhmc.522.0088), in French (_Revue dhistoire moderne et contemporaine_, 2005).
- [Analyser les réseaux du passé en archéologie et en histoire](https://doi.org/10.4000/nda.2300), in French (_Les Nouvelles de lArchéologie_, 2014).
- [Formale Methoden der Netzwerkanalyse in den Geschichtswissenschaften: Warum und Wie? [Formal Network Methods in History: Why and How?]](http://www.studienverlag.at/data.cfm?vpath=openaccess/oezg-12012-lemercier&download=yes), in German ([preprint in English](http://halshs.archives-ouvertes.fr/halshs-00521527); _Österreichische Zeitschrift für Geschichtswissenschaften_, 2012).
- [From Hermeneutics to Data to Networks: Data Extraction and Network Visualization of Historical Sources](http://programminghistorian.org/lessons/creating-network-diagrams-from-historical-sources) (_Programming Historian_, 2015).
- [Graph Theory and Networks in Biology](https://doi.org/10.1049/iet-syb:20060038) ([preprint](http://arxiv.org/abs/q-bio/0604006); _IET Systems Biology_, 2007).
- [Introduction à la visualisation de données : lanalyse de réseau en histoire](http://www.martingrandjean.ch/introduction-visualisation-de-donnees-analyse-de-reseau-histoire/), in French (_Geschichte und Informatik_, 2015).
- [Introduction : où en est lanalyse de réseaux en histoire ? [Introducción: ¿en qué punto se encuentra el análisis de redes en Historia?]](http://revistes.uab.cat/redes/article/view/v21-bertran-guzziheeb-lemercier/299), in French ([also in Spanish](http://revistes.uab.cat/redes/article/view/v21-bertran-guzziheeb-lemercier/298); _REDES_, 2011).
- [Networks and History](http://onlinelibrary.wiley.com/doi/10.1002/cplx.10054/abstract) (_Complexity_, 2002).
- [Graph Theory and Networks in Biology](https://doi.org/10.1049/iet-syb:20060038) ([preprint](https://arxiv.org/abs/q-bio/0604006); _IET Systems Biology_, 2007).
- [Introduction à la visualisation de données : lanalyse de réseau en histoire](https://www.martingrandjean.ch/introduction-visualisation-de-donnees-analyse-de-reseau-histoire/), in French (_Geschichte und Informatik_, 2015).
- [Introduction : où en est lanalyse de réseaux en histoire ? [Introducción: ¿en qué punto se encuentra el análisis de redes en Historia?]](https://doi.org/10.5565/rev/redes.416), in French and Spanish (_REDES_, 2011).
- [Networks and History](https://doi.org/10.1002/cplx.10054) (_Complexity_, 2002).
- [Networks in Historical Research](http://www.themacroscope.org/?page_id=308) (in _The Historians Macroscope_, 2013).
- [Networks of Power in Archaeology](http://www.annualreviews.org/doi/abs/10.1146/annurev-anthro-102313-025901) (_Annual Review of Anthropology_, 2014).
- [Netzwerkanalyse in den Geschichtswissenschaften. Historische Netzwerkanalyse als Methode für die Erforschung von historischen Prozessen](https://www.academia.edu/449150/Netzwerkanalyse_in_den_Geschichtswissenschaften._Historische_Netzwerkanalyse_als_Methode_f%C3%BCr_die_Erforschung_von_historischen_Prozessen), in German (_[Prozesse. Formen, Dynamiken, Erklärungen](https://www.springer.com/de/book/9783531176604)_, 2015).
- [Networks of Power in Archaeology](https://doi.org/10.1146/annurev-anthro-102313-025901) (_Annual Review of Anthropology_, 2014).
- [Netzwerkanalyse in den Geschichtswissenschaften. Historische Netzwerkanalyse als Methode für die Erforschung von historischen Prozessen](https://www.researchgate.net/publication/300723171_Netzwerkanalyse_in_den_Geschichtswissenschaften_Historische_Netzwerkanalyse_als_Methode_fur_die_Erforschung_von_historischen_Prozessen), in German (_[Prozesse. Formen, Dynamiken, Erklärungen](https://www.springer.com/de/book/9783531176604)_, 2015).
- [The Roots and Shoots of Archaeological Network Analysis: A Citation Analysis and Review of the Archaeological Use of Formal Network Methods](https://www.academia.edu/6925120/Brughmans_T._2014_._The_roots_and_shoots_of_archaeological_network_analysis_A_citation_analysis_and_review_of_the_archaeological_use_of_formal_network_methods._Archaeological_Review_from_Cambridge_29_1_) (_Archaeological Review from Cambridge_, 2014).
- [Thinking Through Networks: A Review of Formal Network Methods in Archaeology](http://link.springer.com/article/10.1007/s10816-012-9133-8) (_Journal of Archaeological Method and Theory_, 2013).
- [Thinking Through Networks: A Review of Formal Network Methods in Archaeology](https://doi.org/10.1007/s10816-012-9133-8) (_Journal of Archaeological Method and Theory_, 2013).
### Bibliographic, Citation and Semantic Networks
- [Assessing Impact and Quality from Local Dynamics of Citation Networks](http://www.sciencedirect.com/science/article/pii/S1751157711000770) (_Journal of Informetrics_, 2012).
- [Atypical Combinations and Scientific Impact](http://science.sciencemag.org/content/342/6157/468) (_Science_, 2013).
- [On Bibliographic Networks](http://link.springer.com/article/10.1007%2Fs11192-012-0940-1) (_Scientometrics_, 2013).
- [Assessing Impact and Quality from Local Dynamics of Citation Networks](https://doi.org/10.1016/j.joi.2011.08.005) (_Journal of Informetrics_, 2012).
- [Atypical Combinations and Scientific Impact](https://doi.org/10.1126/science.1240474) (_Science_, 2013).
- [On Bibliographic Networks](https://doi.org/10.1007/s11192-012-0940-1) (_Scientometrics_, 2013).
- [Dynamic Scientific Co-Authorship Networks](http://patrickdoreian.com/wp-content/uploads/2017/12/dynamic-scientific-coauthorship-networks.pdf) (_[Models of Science Dynamics](https://www.springer.com/us/book/9783642230677)_, 2012).
- [Extracting Citation Networks from Publications in Classics](http://www.digitalhumanities.org/dhq/vol/10/2/000255/000255.html) (_Digital Humanities Quarterly_, 2016).
- [Self-Citations, Co-Authorships and Keywords: A New Approach to Scientists Field Mobility?](https://link.springer.com/article/10.1007/s11192-007-1680-5) (_Scientometrics_, 2007).
- [Socio-Semantic Frameworks](http://www.worldscientific.com/doi/abs/10.1142/S0219525913500136) ([preprint](http://camille.roth.free.fr/travaux/roth--sociosemantic-systems-acs-proofs.pdf); _Advances in Complex Systems_, 2013).
- [Socio-Semantic Modeling of Epistemic Communities](http://papers.ssrn.com/sol3/papers.cfm?abstract_id=2452614) (APSA, 2014).
- [Tradition and Innovation in Scientists Research Strategies](http://asr.sagepub.com/content/early/2015/08/12/0003122415601618) (_Annual Review of Sociology_, 2015).
- [Self-Citations, Co-Authorships and Keywords: A New Approach to Scientists Field Mobility?](https://doi.org/10.1007/s11192-007-1680-5) (_Scientometrics_, 2007).
- [Socio-Semantic Frameworks](https://doi.org/10.1142/S0219525913500136) ([preprint](http://camille.roth.free.fr/travaux/roth--sociosemantic-systems-acs-proofs.pdf); _Advances in Complex Systems_, 2013).
- [Socio-Semantic Modeling of Epistemic Communities](https://ssrn.com/abstract=2452614) (APSA, 2014).
- [Tradition and Innovation in Scientists Research Strategies](https://doi.org/10.1177/0003122415601618) (_Annual Review of Sociology_, 2015).
### Biological, Ecological and Disease Networks
- [Biological Networks](http://kops.uni-konstanz.de/handle/123456789/25907) (_Handbook of Graph Drawing and Visualization_, 2014).
- [Interactome Networks and Human Disease](http://barabasi.com/f/326.pdf) (_Cell_, 2011).
- [Network Analysis: An Integrative Approach to the Structure of Psychopathology](http://www.annualreviews.org/doi/full/10.1146/annurev-clinpsy-050212-185608) (_Annual Review of Clinical Psychology_, 2013).
- [Network Biology: Understanding the Cells Functional Organization](http://barabasi.com/f/147.pdf) - Accessible introduction to (cellular) network analysis (_Nature Reviews Genetics_, 2004).
- [Network Medicine: A Network-based Approach to Human Disease](http://barabasi.com/f/320.pdf) (_Nature Review Genetics_, 2011).
- [Social Networks and the Spread of Infectious Diseases: the AIDS Example](http://www.sciencedirect.com/science/article/pii/0277953685902692) (_Social Networks_, 1985).
- [Structure and Dynamics of Molecular Networks: A Novel Paradigm of Drug Discovery. A Comprehensive Review](http://www.sciencedirect.com/science/article/pii/S0163725813000284) - Also includes an impressive list of network analysis software (_Pharmacology & Therapeutics_, 2013).
- [Interactome Networks and Human Disease](https://barabasi.com/f/326.pdf) (_Cell_, 2011).
- [Network Analysis: An Integrative Approach to the Structure of Psychopathology](https://doi.org/10.1146/annurev-clinpsy-050212-185608) (_Annual Review of Clinical Psychology_, 2013).
- [Network Biology: Understanding the Cells Functional Organization](https://barabasi.com/f/147.pdf) - Accessible introduction to (cellular) network analysis (_Nature Reviews Genetics_, 2004).
- [Network Medicine: A Network-based Approach to Human Disease](https://barabasi.com/f/320.pdf) (_Nature Review Genetics_, 2011).
- [Social Networks and the Spread of Infectious Diseases: the AIDS Example](https://doi.org/10.1016/0277-9536(85)90269-2) (_Social Networks_, 1985).
- [Structure and Dynamics of Molecular Networks: A Novel Paradigm of Drug Discovery. A Comprehensive Review](https://doi.org/10.1016/j.pharmthera.2013.01.016) - Also includes an impressive list of network analysis software (_Pharmacology & Therapeutics_, 2013).
### Complex and Multilayer Networks
- [The Architecture of Complexity](http://barabasi.com/f/226.pdf) - From network theory to complexity theory (_IEEE Control Systems Magazine_, 2007).
- [Complex Systems and Networks](http://science.sciencemag.org/content/325/5939) (special issue of _Science_, 2009).
- [The Architecture of Complexity](https://barabasi.com/f/226.pdf) - From network theory to complexity theory (_IEEE Control Systems Magazine_, 2007).
- [Complex Systems and Networks](https://www.science.org/toc/science/325/5939) (special issue of _Science_, 2009).
- [Multilayer Networks in a Nutshell](https://doi.org/10.1146/annurev-conmatphys-031218-013259) (_Annual Review of Condensed Matter Physics_, 2019).
- [Statistical Mechanics of Complex Networks](http://barabasi.com/f/103.pdf) (_Reviews of Modern Physics_, 2002).
- [Statistical Mechanics of Complex Networks](https://barabasi.com/f/103.pdf) (_Reviews of Modern Physics_, 2002).
- [The Structure and Function of Complex Networks](http://epubs.siam.org/doi/abs/10.1137/S003614450342480) (_SIAM Review_, 2003).
### Ethics of Network Analysis
- [A Cautionary Note on Data Inputs and Visual Outputs in Social Network Analysis (SNA)](http://onlinelibrary.wiley.com/doi/10.1111/j.1467-8551.2012.00835.x/abstract) ([preprint][conway2014]; _British Journal of Management_, 2014).
- [Ethical Dilemmas in Social Network Research](http://www.sciencedirect.com/science/journal/03788733/27/2) (special issue of _Social Networks_, 2005).
- [A Cautionary Note on Data Inputs and Visual Outputs in Social Network Analysis (SNA)](https://doi.org/10.1111/j.1467-8551.2012.00835.x) ([preprint][conway2014]; _British Journal of Management_, 2014).
- [Ethical Dilemmas in Social Network Research](https://www.sciencedirect.com/journal/social-networks/vol/27/issue/2) (special issue of _Social Networks_, 2005).
- [Ethical and Strategic Issues in Organizational Social Network Analysis](http://www.analytictech.com/borgatti/papers/ethics.pdf) (_The Journal of Applied Behavioral Science_, 2003).
[conway2014]: https://lra.le.ac.uk/bitstream/2381/36068/2/Draft%20BJM%20Revised%20(3rd%20iteration)%20Manuscript.pdf
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- [A Brief History of Statistical Models for Network Analysis and Open Challenges][fienberg2012] (_Journal of Computational and Graphical Statistics_, 2012).
- [Basic Models and Questions in Statistical Network Analysis](https://projecteuclid.org/euclid.ssu/1504836152) (_Statistics Surveys_, 2017).
- [Introduction to Stochastic Actor-Based Models for Network Dynamics](http://www.sciencedirect.com/science/article/pii/S0378873309000069) ([preprint](http://www.stats.ox.ac.uk/~snijders/SnijdersSteglichVdBunt2009.pdf); _Social Networks_, 2010).
- [Introduction to Stochastic Actor-Based Models for Network Dynamics](https://doi.org/10.1016/j.socnet.2009.02.004) ([preprint](http://www.stats.ox.ac.uk/~snijders/SnijdersSteglichVdBunt2009.pdf); _Social Networks_, 2010).
- [Navigating the Range of Statistical Tools for Inferential Network Analysis](https://doi.org/10.1111/ajps.12263) (_American Journal of Political Science_, 2017).
- [Positional Analysis and Blockmodeling](http://link.springer.com/referenceworkentry/10.1007%2F978-1-4614-1800-9_138) (<!-- [preprint](http://patrickdoreian.com/NEW/wp-content/papers_resources/chapters/Positional_Analysis_and_Blockmodeling.pdf); -->_Computational Complexity_, 2012).
- [Social Network Evolution and Actor Oriented Models](https://journals.openedition.org/msh/2750) (_Mathematics & Social Sciences_, 1997).
- [Statistical Models for Social Networks](http://www.annualreviews.org/doi/abs/10.1146/annurev.soc.012809.102709) (_Annual Review of Sociology_, 2011).
- [A Survey of Statistical Network Models](https://dl.acm.org/citation.cfm?id=1734795) - Book-length review ([preprint](http://arxiv.org/abs/0912.5410); _Foundations and Trends in Machine Learning_, 2010).
- [A Unified View of Generative Models for Networks: Models, Methods, Opportunities, and Challenges](http://arxiv.org/abs/1411.4070) ([video presentation](http://www.birs.ca/events/2015/5-day-workshops/15w5080/videos/watch/201504200944-Jacobs.html); [NIPS 2014 workshop](https://nips.cc/Conferences/2014/Schedule?type=Workshop) on “[Networks: From Graphs to Rich Data](https://410f84824e101297359cc81c78f45c7c079eb26c.googledrive.com/host/0Bz6WHrWac3FrWnA5MjZqb3lWa2c/)”).
- [Social Network Evolution and Actor Oriented Models](https://doi.org/10.4000/msh.2750) (_Mathematics & Social Sciences_, 1997).
- [Statistical Models for Social Networks](https://doi.org/10.1146/annurev.soc.012809.102709) (_Annual Review of Sociology_, 2011).
- [A Survey of Statistical Network Models](https://dl.acm.org/citation.cfm?id=1734795) - Book-length review ([preprint](https://arxiv.org/abs/0912.5410); _Foundations and Trends in Machine Learning_, 2010).
- [A Unified View of Generative Models for Networks: Models, Methods, Opportunities, and Challenges](https://arxiv.org/abs/1411.4070) ([video presentation](http://www.birs.ca/events/2015/5-day-workshops/15w5080/videos/watch/201504200944-Jacobs.html); [NIPS 2014 workshop](https://nips.cc/Conferences/2014/Schedule?type=Workshop) on “[Networks: From Graphs to Rich Data](https://410f84824e101297359cc81c78f45c7c079eb26c.googledrive.com/host/0Bz6WHrWac3FrWnA5MjZqb3lWa2c/)”).
[fienberg2012]: http://www.stat.cmu.edu/~brian/780/hw01/Fienberg%20(2012)%20A%20Brief%20History%20of%20Statistical%20Models%20for%20Network%20Analysis%20and%20Open%20Challenges.pdf
@ -428,11 +428,11 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
> See also the bibliographies [by Eszter Hargittai](http://eszter.com/contract.html#socnet), [by Pierre François](http://pierrefrancois.wifeo.com/documents/Cours-rseau---biblio-gnrale.pdf) and [by Pierre Mercklé](http://socio.ens-lyon.fr/merckle/merckle_communications_2008_cargese_reseaux_nuls_biblio.pdf).
- [A propos de la notion de rôle dans lanalyse des relations sociales](https://journals.openedition.org/msh/11969) (_Mathématiques et sciences humaines_, 2011).
- [Brokerage](http://www.annualreviews.org/doi/abs/10.1146/annurev-soc-081309-150054) (_Annual Review of Sociology_, 2012).
- [Birds of a Feather: Homophily in Social Networks](http://www.annualreviews.org/doi/abs/10.1146/annurev.soc.27.1.415) (_Annual Review of Sociology_, 2001).
- [A propos de la notion de rôle dans lanalyse des relations sociales](https://doi.org/10.4000/msh.11969) (_Mathématiques et sciences humaines_, 2011).
- [Brokerage](https://doi.org/10.1146/annurev-soc-081309-150054) (_Annual Review of Sociology_, 2012).
- [Birds of a Feather: Homophily in Social Networks](https://doi.org/10.1146/annurev.soc.27.1.415) (_Annual Review of Sociology_, 2001).
- [Mixed-Method Approaches to Social Network Analysis](http://eprints.ncrm.ac.uk/842/) (ESRC NCRM Discussion Paper, 2010).
- [Network Analysis and Political Science](http://www.annualreviews.org/doi/abs/10.1146/annurev.polisci.12.040907.115949) (_Annual Review of Political Science_, 2011).
- [Network Analysis and Political Science](https://doi.org/10.1146/annurev.polisci.12.040907.115949) (_Annual Review of Political Science_, 2011).
- [Network Analysis for International Relations](https://www.cambridge.org/core/journals/international-organization/article/div-classtitlenetwork-analysis-for-international-relationsdiv/DE2910979C1B5C44C4CC13F336C5DE97) (_International Organization_, 2009).
- [Network Analysis in the Social Sciences](http://science.sciencemag.org/content/323/5916/892) (_Science_, 2009).
- [Networks and Trade](https://doi.org/10.1146/annurev-economics-080217-053506) (_Annual Review of Economics_, 2018).
@ -451,27 +451,27 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
- [Aux sources des grands réseaux dinteractions. Retour sur quelques propriétés déterminantes des réseaux sociaux issus de corpus documentaires](https://www.cairn.info/revue-reseaux1-2008-6-page-21.htm), by Pascal Cristofoli, in French - Reviews the current state of relational sociology and network analysis in light of the large-scale and online data (_Réseaux_, 2008).
- [Birds of a Feather, Or Friend of a Friend? Using Exponential Random Graph Models to Investigate Adolescent Social Networks](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2831261/), by Steven M. Goodreau, James A. Kitts and Martina Morris - Accessible introduction to the logic and application of exponential random graph modeling (_Demography_, 2001).
- [Chains of Affection: The Structure of Adolescent Romantic and Sexual Networks](http://www.soc.duke.edu/~jmoody77/chains.pdf), by Peter S. Bearman, James Moody and Katherine Stovel - Classic example of topological network analysis applied to a network of affective and sexual ties (_American Journal of Sociology_, 2004).
- [Coauthorship and Citation Patterns in the _Physical Review_](http://journals.aps.org/pre/abstract/10.1103/PhysRevE.88.012814), by Travis Martin _et al._ - Highly typical study of scientific publishing productivity and collaboration through temporal network analysis ([preprint](http://arxiv.org/abs/1304.0473); _Physical Review E_, 2013).
- [Coauthorship and Citation Patterns in the _Physical Review_](https://doi.org/10.1103/PhysRevE.88.012814), by Travis Martin _et al._ - Highly typical study of scientific publishing productivity and collaboration through temporal network analysis ([preprint](https://arxiv.org/abs/1304.0473); _Physical Review E_, 2013).
- [The Convergence of Social and Technological Networks](https://www.cs.cornell.edu/home/kleinber/cacm08.pdf), by Jon Kleinberg - Discusses small-world effects and social contagion within the context of the Internet and social media (_Communications of the ACM_, 2008).
- [Deux traditions danalyse des reseaux sociaux](https://www.cairn.info/revue-reseaux1-2002-5-page-183.htm), by Michael Eve ([English version](https://www.academia.edu/14524365/THE_TWO_TRADITIONS_OF_NETWORK_ANALYSIS); _Réseaux_, 2002).
- [Homophily and Contagion Are Generically Confounded in Observational Social Network Studies](https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3328971/), by Cosma R. Shalizi and Andrew C. Thomas - Makes a very important point for the analysis of network diffusion and influence (_Sociological Methods and Research_, 2011).
- [La notion de réseau complexe : du réseau comme abstraction et outil à la masse de données des réseaux sociaux en ligne](https://journals.openedition.org/communicationorganisation/4093), by Alain Barrat, in French - Accessible introduction to the study of complex networks (_Communication & Organisation_, 2013).
- [Network Analysis, Culture, and the Problem of Agency](http://www.mustafaemirbayer.com/network-analysis-culture-and-the-pr), by Mustafa Emirbayer and Jeff Goodwin (_American Journal of Sociology_, 1994), and [Manifesto for a Relational Sociology](http://www.mustafaemirbayer.com/copy-3-of-bourdieu), by Mustafa Emirbayer (_American Journal of Sociology_, 1997) - Sociological foundations for a science of social ties.
- [La notion de réseau complexe : du réseau comme abstraction et outil à la masse de données des réseaux sociaux en ligne](https://doi.org/10.4000/communicationorganisation.4093), by Alain Barrat, in French - Accessible introduction to the study of complex networks (_Communication & Organisation_, 2013).
- [Network Analysis, Culture, and the Problem of Agency](https://www.mustafaemirbayer.com/network-analysis-culture-and-the-pr), by Mustafa Emirbayer and Jeff Goodwin (_American Journal of Sociology_, 1994), and [Manifesto for a Relational Sociology](https://www.mustafaemirbayer.com/copy-3-of-bourdieu), by Mustafa Emirbayer (_American Journal of Sociology_, 1997) - Sociological foundations for a science of social ties.
- [Network Theory, Plot Analysis](https://sydney.edu.au/intellectual-history/documents/moretti_network_theory_plot_analysis.pdf), by Franco Moretti - Example applications of (fictional) network analysis in literary studies (_New Left Review_, 2011).
- [Node Centrality in Weighted Networks: Generalizing Degree and Shortest Paths](http://www.sciencedirect.com/science/article/pii/S0378873310000183), by Tore Opsahl, Filip Agneessens and John Skvoretz - Explores the generalization of network centrality and distance measures to (positively) valued graphs (_Social Networks_, 2010; [companion website](https://toreopsahl.com/tnet/)).
- [Scale-Free Networks](http://barabasi.com/f/124.pdf), by Albert-László Barabási and Eric Bonabeau - Early, accessible formulation of the “networks are everywhere” argument (_Scientific American_, 2003).
- [Node Centrality in Weighted Networks: Generalizing Degree and Shortest Paths](https://doi.org/10.1016/j.socnet.2010.03.006), by Tore Opsahl, Filip Agneessens and John Skvoretz - Explores the generalization of network centrality and distance measures to (positively) valued graphs (_Social Networks_, 2010; [companion website](https://toreopsahl.com/tnet/)).
- [Scale-Free Networks](https://barabasi.com/f/124.pdf), by Albert-László Barabási and Eric Bonabeau - Early, accessible formulation of the “networks are everywhere” argument (_Scientific American_, 2003).
- [Social Networks and Causal Inference](http://link.springer.com/chapter/10.1007/978-94-007-6094-3_17), by Tyler J. VanderWeele and Weihua An - Reviews the different ways in which network analysis can produce meaningful causal statements, as well as the inherent limits of network analysis for doing so (_[Handbook of Causal Analysis for Social Research](http://link.springer.com/book/10.1007/978-94-007-6094-3)_, 2013).
- [The Performativity of Networks](http://kieranhealy.org/files/papers/performativity.pdf), by Kieran Healy - Network analysis meets science studies: social networks, like financial markets, are highly subject to performativity, i.e. the possibility that reality might be altered by its theoretical inquiry (_European Journal of Sociology_, 2015).
- [The Performativity of Networks](https://kieranhealy.org/files/papers/performativity.pdf), by Kieran Healy - Network analysis meets science studies: social networks, like financial markets, are highly subject to performativity, i.e. the possibility that reality might be altered by its theoretical inquiry (_European Journal of Sociology_, 2015).
- [Revisiting the Foundations of Network Analysis](http://science.sciencemag.org/content/325/5939/414), by Carter T. Butts - On choosing the right network representation to frame a research problem.
- [Robust Action and the Rise of the Medici, 1400-1434](http://home.uchicago.edu/~jpadgett/papers/published/robust.pdf), by John F. Padgett and Christopher K. Ansell - Classic analysis of power relations in the Renaissance Florentine state (_American Journal of Sociology_, 1993).
- [The Strength of Weak Ties](https://sociology.stanford.edu/sites/default/files/publications/the_strength_of_weak_ties_and_exch_w-gans.pdf), by Mark Granovetter - Arch-classic example of applying network analysis to a social issue: jobseeking (_American Journal of Sociology_, 1973).
- [The Ties that Divide: A Network Analysis of the International Monetary System, 18901910](http://www.stats.ox.ac.uk/~snijders/FlandreauJobst2005.pdf) (_The Journal of Economic History_, 2005) and [The Empirics of International Currencies: Network Externalities, History and Persistence](http://onlinelibrary.wiley.com/doi/10.1111/j.1468-0297.2009.02219.x/abstract) (_The Economic Journal_, 2009), both by Marc Flandreau and Clemens Jobst - Network analysis of the foreign exchange system in the late 19th century ([data](http://eh.net/database/international-currencies-1890-1910/)).
- [Topics in Social Network Analysis and Network Science](http://arxiv.org/abs/1404.0067), by A. James OMalley and Jukka-Pekka Onnela - 50-page introduction to network analysis, with just the right amount of detail on all aspects of it (_The Handbook of Health Services Research_, forthcoming 2017).
- [The Ties that Divide: A Network Analysis of the International Monetary System, 18901910](http://www.stats.ox.ac.uk/~snijders/FlandreauJobst2005.pdf) (_The Journal of Economic History_, 2005) and [The Empirics of International Currencies: Network Externalities, History and Persistence](https://doi.org/10.1111/j.1468-0297.2009.02219.x) (_The Economic Journal_, 2009), both by Marc Flandreau and Clemens Jobst - Network analysis of the foreign exchange system in the late 19th century ([data](http://eh.net/database/international-currencies-1890-1910/)).
- [Topics in Social Network Analysis and Network Science](https://arxiv.org/abs/1404.0067), by A. James OMalley and Jukka-Pekka Onnela - 50-page introduction to network analysis, with just the right amount of detail on all aspects of it (_The Handbook of Health Services Research_, forthcoming 2017).
## Software
> For a hint of why this section of the list might be useful to some, see [Mark Rounds Map of Data Formats and Software Tools](http://mdround.blogs.com/usingnetworks/2009/07/sna-tools-and-formats-diagram-updated.html) (2009).
> Several links in this section come from the [NetWiki Shared Code](http://netwiki.amath.unc.edu/SharedCode/SharedCode) page, from the Cambridge Networks Network [List of Resources for Complex Network Analysis](http://www.cnn.group.cam.ac.uk/Resources), and from the [Software for Social Network Analysis](http://www.gmw.rug.nl/~huisman/sna/software.html) page by Mark Huisman and Marijtje A.J. van Duijn. For a recent academic review on the subject, see the [Social Network Algorithms and Software](http://www.sciencedirect.com/science/article/pii/B9780080970868431211) entry of the _International Encyclopedia of Social and Behavioral Sciences_, 2nd edition (2015).
> Several links in this section come from the [NetWiki Shared Code](http://netwiki.amath.unc.edu/SharedCode/SharedCode) page, from the Cambridge Networks Network [List of Resources for Complex Network Analysis](http://www.cnn.group.cam.ac.uk/Resources), and from the [Software for Social Network Analysis](http://www.gmw.rug.nl/~huisman/sna/software.html) page by Mark Huisman and Marijtje A.J. van Duijn. For a recent academic review on the subject, see the [Social Network Algorithms and Software](https://doi.org/10.1016/B978-0-08-097086-8.43121-1) entry of the _International Encyclopedia of Social and Behavioral Sciences_, 2nd edition (2015).
> See also the [Social Network Analysis Project Survey](https://docs.google.com/spreadsheets/d/1Xo-ehJatzmxMek6gPG0h-d7yRSuiO6_flViTQNMAku0/edit#gid=0) ([blog post](http://pudo.org/blog/2013/12/21/sna-survey.html)), an earlier attempt to chart social network analysis tools that links to many commercial platforms not included in this list, such as [Detective.io](http://www.detective.io/). The Wikipedia English entry on [Social Network Analysis Software](https://en.wikipedia.org/wiki/Social_network_analysis_software) also links to many commercial that are often very expensive, outdated, and far from being awesome by any reasonable standard.
> Software-centric tutorials are listed below their program of choice: other tutorials are listed [in the next section](#tutorials).
@ -539,10 +539,10 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
- [UNISoN](http://unison.sleonard.co.uk/) - Cross-platform program to download and visualize Usenet data. [Developed for a Masters degree](https://github.com/leonarduk/unison/wiki/MSc-Report-Abstract).
- [VennMaker: An Actor-Centered Interactive Network Mapping Tool](http://www.vennmaker.com/?lang=en) - Cross-platform Java program for ego network analysis.
- [VennMaker for Historians: Sources, Social Networks and Software](http://revistes.uab.cat/redes/article/view/v21-during-bixier-kronenwett-stark) (also available in Spanish; 2011).
- [Visone](http://visone.info/) - Cross-platform Java network analysis and visualization program, free for noncommercial use.
- [Network Analysis with Visone Tutorial](http://visone.info/wiki/images/8/8f/VisoneTutorial-archeology.zip) - Illustrated through an archaeological case study (2015).
- [Visone](https://visone.ethz.ch/) - Cross-platform Java network analysis and visualization program, free for noncommercial use.
- [Visone Tutorials](https://visone.ethz.ch/wiki/index.php/Tutorials) - Including one using an archaeological case study (2017).
- [Vizster](http://vis.stanford.edu/jheer/projects/vizster/) - Cross-platform Java program to visualize online social networks.
- [VOSviewer](http://www.vosviewer.com/) - Cross-platform Java tool for constructing and visualizing bibliometric networks.
- [VOSviewer](https://www.vosviewer.com/) - Cross-platform Java tool for constructing and visualizing bibliometric networks.
### Algorithms
@ -550,12 +550,12 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
> See also the [Awesome Algorithms](https://github.com/tayllan/awesome-algorithms) and [Awesome Algorithm Visualization](https://github.com/enjalot/algovis) lists for more algorithmic awesomess.
- [algo.graph](https://github.com/clojure/algo.graph) - Basic graph theory algorithms written in Clojure.
- [CONGA and CONGO](http://gregory.org/research/networks/software/conga.html) - Algorithms to detect overlapping communities in networks, written in Java.
- [CONGA and CONGO](https://gregory.org/research/networks/software/conga.html) - Algorithms to detect overlapping communities in networks, written in Java.
- [ForceAtlas2](https://gephi.wordpress.com/2011/06/06/forceatlas2-the-new-version-of-our-home-brew-layout/) - Force-directed layout included in Gephi ([paper](http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0098679)).
- [Linkcomm - Link Communities in Complex Networks](https://github.com/bagrow/linkcomm) - Community detection algorithms, available in C++, Python [and R](https://cran.r-project.org/package=linkcomm).
- [MixNet - Erdös-Rényi Mixture Model for Networks](http://ssbgroup.fr/mixnet.html) - Community detection method, available in C++ and R.
- [MixNet - Erdös-Rényi Mixture Model for Networks](https://ssbgroup.fr/mixnet.html) - Community detection method, available in C++ and R.
- [OSLOM2 - Order Statistics Local Optimization Method](http://www.oslom.org/) - Clustering algorithm.
- [vbmod: Variational Bayesian Inference for Network Modularity](http://vbmod.sourceforge.net/) - MATLAB and Python implementations of a [Bayesian community detection algorithm](http://arxiv.org/abs/0709.3512).
- [vbmod: Variational Bayesian Inference for Network Modularity](https://vbmod.sourceforge.net/) - MATLAB and Python implementations of a [Bayesian community detection algorithm](https://arxiv.org/abs/0709.3512).
- [weighted-modularity-LPAwbPLUS](https://github.com/sjbeckett/weighted-modularity-LPAwbPLUS) - Julia, MATLAB and R implementations of two algorithms to find weighted modularity in bipartite networks.
### C / C++
@ -563,39 +563,39 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
> For more awesome C / C++ content, see the [Awesome C](https://github.com/aleksandar-todorovic/awesome-c) and [Awesome C / C++](https://github.com/fffaraz/awesome-cpp) lists.
- [Benchmark Graphs to Test Community Detection Algorithms](https://sites.google.com/site/santofortunato/inthepress2) - C++ code to generate weighted and unweighted graphs.
- [BGL - Boost Graph Library](http://www.boost.org/doc/libs/1_60_0/libs/graph/doc/) - C++ library that provides a generic interface to access graph structures.
- [igraph](http://igraph.org/) - C library of network analysis tools; also exists as packages for Python and R.
- [MapEquation](http://www.mapequation.org/) - C++ code for the Infomap method of multilevel community detection.
- [Louvain Method](https://sites.google.com/site/findcommunities/) - C++ code for the [Louvain multi-level community detection algorithm](http://arxiv.org/abs/0803.0476).
- [networks.tb](http://networks-tb.sourceforge.net/) - C program designed for analyzing socio-semantic networks. Runs on Linux and Mac OS X.
- [OGDF - Open Graph Drawing Framework](http://www.ogdf.net/) - Self-contained C++ class library for diagram, network and tree layouts.
- [BGL - Boost Graph Library](https://www.boost.org/doc/libs/1_60_0/libs/graph/doc/) - C++ library that provides a generic interface to access graph structures.
- [igraph](https://igraph.org/) - C library of network analysis tools; also exists as packages for Python and R.
- [MapEquation](https://www.mapequation.org/) - C++ code for the Infomap method of multilevel community detection.
- [Louvain Method](https://sites.google.com/site/findcommunities/) - C++ code for the [Louvain multi-level community detection algorithm](https://arxiv.org/abs/0803.0476).
- [networks.tb](https://networks-tb.sourceforge.net/) - C program designed for analyzing socio-semantic networks. Runs on Linux and Mac OS X.
- [OGDF - Open Graph Drawing Framework](https://ogdf.uos.de/) - Self-contained C++ class library for diagram, network and tree layouts.
- [OpenOrd: Large-scale Graph Layout (formerly DrL)](http://www.cs.sandia.gov/~smartin/software.html) - C++ algorithm, also available as a [Gephi plugin](https://gephi.org/plugins/#/plugin/openord-layout).
- [Stanford Network Analysis Project](http://snap.stanford.edu/) - C++ general purpose network analysis and graph mining library. Available as a Python library and in Microsoft Excel via NodeXL.
- [Walktrap](https://www-complexnetworks.lip6.fr/~latapy/PP/walktrap.html) - C++ program that implements the [WalkTrap community detection algorithm](http://arxiv.org/abs/physics/0512106).
- [Walktrap](https://www-complexnetworks.lip6.fr/~latapy/PP/walktrap.html) - C++ program that implements the [WalkTrap community detection algorithm](https://arxiv.org/abs/physics/0512106).
### Java
- [GraphStream](http://graphstream-project.org/) - Java library for the modeling and analysis of dynamic graphs.
- [GraphStream](https://graphstream-project.org/) - Java library for the modeling and analysis of dynamic graphs.
- [Mixer](https://github.com/keith-turner/mixer) - Prototype showing how to use [Apache Fluo](https://fluo.apache.org/) to continuously merge multiple large graphs into a single derived one.
### JavaScript
> For more awesome JavaScript libraries, see the [Awesome JavaScript](https://github.com/sorrycc/awesome-javascript) list.
- [Cytoscape.js](http://js.cytoscape.org/) - Network analysis and visualization library.
- [Cytoscape.js](https://js.cytoscape.org/) - Network analysis and visualization library.
- [d3.js](https://d3js.org/) - JavaScript visualization library that can plot [force-directed graphs](http://bl.ocks.org/mbostock/4062045).
- [d3-force: Force-directed graph layout](https://github.com/d3/d3-force) using velocity Verlet integration.
- [d3-vector: Define connections between nodes as directional vectors](https://github.com/thepeoplesbourgeois/d3-vector), consisting of angles and magnitudes.
- [GENSI](http://www.tobiasstark.nl/GENSI/GENSI.htm) - JavaScript graphical tool to collect ego-centered network data ([paper](http://www.sciencedirect.com/science/article/pii/S0378873316300284)).
- [GoJS](http://gojs.net/) - Visualization library to draw diagrams and several types of network layouts.
- [GENSI](http://www.tobiasstark.nl/GENSI/GENSI.htm) - JavaScript graphical tool to collect ego-centered network data ([paper](https://doi.org/10.1016/j.socnet.2016.07.007)).
- [GoJS](https://gojs.net/) - Visualization library to draw diagrams and several types of network layouts.
- [Graphology](https://graphology.github.io/) - Specification and reference implementation for a robust and multipurpose JavaScript `Graph` object.
- [greuler](https://mauriciopoppe.github.io/greuler/) - Visualization library to build and manipulate graphs through a simple API. Powered by d3.js and [WebCola](http://marvl.infotech.monash.edu/webcola/).
- [greuler](https://mauriciopoppe.github.io/greuler/) - Visualization library to build and manipulate graphs through a simple API. Powered by d3.js and [WebCola](https://ialab.it.monash.edu/webcola/).
- [jLouvain](https://github.com/upphiminn/jLouvain) - Louvain community detection for Javascript ([example](http://bl.ocks.org/emeeks/125db75c9b55ddcbdeb5)).
- [NetworkCube](https://github.com/networkcube/networkcube) - "Dynamic Network Visualizations [for] Domain Scientists." For demo examples, see [The Vistorian](https://networkcube.github.io/vistorian/).
- [Oligrapher](https://github.com/public-accountability/oligrapher) - Library initially developed to visualise ["networks of influence" among U.S. elites](https://littlesis.org/).
- [Popoto.js](http://www.popotojs.com/) - Library based on d3.js that provides a graph based search interface.
- [Sigma](http://sigmajs.org/) - JavaScript library dedicated to graph drawing.
- [vis.js](http://visjs.org/) - JavaScript library with network visualization capabilities.
- [Popoto.js](https://github.com/Nhogs/popoto) - Library based on d3.js that provides a graph based search interface.
- [Sigma](https://www.sigmajs.org/) - JavaScript library dedicated to graph drawing.
- [vis.js](https://visjs.org/) - JavaScript library with network visualization capabilities.
- [VivaGraphJS](https://github.com/anvaka/VivaGraphJS) - Graph drawing library ([ForceAtlas2 plugin](https://github.com/graphcommons/viva.forceatlas2)).
- [viz.js](https://mdaines.github.io/viz.js/) - Use Graphviz in Web pages.
@ -900,9 +900,9 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
- [Network Analysis of Shakespeares _Macbeth_](https://mboudour.github.io/2015/10/28/Shakespeare's-Macbeth-Network.html) (using Python).
- [The Network and Trajectories of Transitions among Sentential Co-Occurrences of Characters of Arthur Conan Doyles _A Study in Scarlet_](https://mboudour.github.io/2016/04/17/Arthur-Conan-Doyle's-A-Study-in-Scarlet-Network-&-Trajectories.html) (using Python; [code](https://github.com/mboudour/WordNets/blob/master/ArthurConanDoyle_AStudyInScarlet_Network%26Trajectories.ipynb)).
- [Network Visualization: Mapping Shakespeares Tragedies](http://www.martingrandjean.ch/network-visualization-shakespeare/).
- [Social Network Analysis of _Alice in Wonderland_](http://www.cs.columbia.edu/~apoorv/Homepage/Publications_files/naacl2012.pdf).
- [Social Network Analysis of _Alice in Wonderland_](https://aclanthology.org/W12-2513/).
- [_Star Wars_ Social Networks: The Force Awakens](http://evelinag.com/blog/2016/01-25-social-network-force-awakens/index.html) - Also an example of a social network analysis written in F#.
- [Universal Properties of Mythological Networks](http://epljournal.edpsciences.org/articles/epl/abs/2012/14/epl14724/epl14724.html) ([preprint](http://arxiv.org/abs/1205.4324)).
- [Universal Properties of Mythological Networks](https://doi.org/10.1209/0295-5075/99/28002) ([preprint](https://arxiv.org/abs/1205.4324)).
### Network Science
@ -910,13 +910,13 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
- [Editing a Normal Science Journal in Social Science](https://journals.openedition.org/bms/595) - Reflections on the _Social Networks_ journal by its founding editor.
- [The Emergence of Network Science](https://www.cornell.edu/video/emergence-of-network-science) - Video documentary, featuring Steven H. Strogatz and many others.
- From [Albert-László Barabásis review articles](http://barabasi.com/publications/1/review-articles):
- [Taming Complexity](http://barabasi.com/f/182.pdf).
- [The Network Takeover](http://barabasi.com/f/362.pdf).
- [The Invasion of the Physicists](http://www.sciencedirect.com/science/article/pii/S0378873304000309) - How “network _science_” came up.
- [Isolated Social Networkers](http://crookedtimber.org/2005/05/19/isolated-social-networkers/), [Networks and Netwars](http://bactra.org/weblog/347.html) and [The Inter-Disciplinary Politics of Interdisciplinary Research or, “Hey, That Was My Idea First.”](https://www.cs.unm.edu/~aaron/blog/archives/2005/05/the_interdiscip.htm) - Series of blog posts that predate the advent of “network science” as a buzzword, but that touch upon the same issues as those now being discussed under that heading.
- From [Albert-László Barabásis review articles](https://barabasi.com/publications/1/review-articles):
- [Taming Complexity](https://barabasi.com/f/182.pdf).
- [The Network Takeover](https://barabasi.com/f/362.pdf).
- [The Invasion of the Physicists](https://doi.org/10.1016/j.socnet.2004.06.002) - How “network _science_” came up.
- [Isolated Social Networkers](https://crookedtimber.org/2005/05/19/isolated-social-networkers/), [Networks and Netwars](http://bactra.org/weblog/347.html) and [The Inter-Disciplinary Politics of Interdisciplinary Research or, “Hey, That Was My Idea First.”](https://www.cs.unm.edu/~aaron/blog/archives/2005/05/the_interdiscip.htm) - Series of blog posts that predate the advent of “network science” as a buzzword, but that touch upon the same issues as those now being discussed under that heading.
- [The New Science of Networks](https://www.jstor.org/stable/29737693) - Review of network science books published in 2002-2003.
- [Predicting Highly Cited Papers](http://arxiv.org/abs/1310.8220) - Prediction of the next highly cited papers in network science.
- [Predicting Highly Cited Papers](https://arxiv.org/abs/1310.8220) - Prediction of the next highly cited papers in network science.
- [Social Network and Network Science Co-Citations Across Disciplines in 1996-2013](https://github.com/raffaelevacca/EUSN-co-citation-networks).
- [Three Hard Questions about Network Science](http://environmentalpolicy.ucdavis.edu/node/292).
- [A Twenty-First Century Science](http://www.nature.com/nature/journal/v445/n7127/full/445489a.html) - Essay by Duncan J. Watts.
@ -939,10 +939,10 @@ __Note:__ searching for @ will return all Twitter accounts listed on this
> Also known as bipartite graphs.
- [Lanalyse des graphes bipartis](https://halshs.archives-ouvertes.fr/FMR/halshs-00794976), in French (2013).
- [Basic Notions for the Analysis of Large Two-mode Networks](http://www.sciencedirect.com/science/article/pii/S0378873307000494) ([preprint](https://www-complexnetworks.lip6.fr/~latapy/Publis/socnet07.pdf), [related code](https://www-complexnetworks.lip6.fr/~latapy/Bip/); _Social Networks_, 2008).
- [Basic Notions for the Analysis of Large Two-mode Networks](https://doi.org/10.1016/j.socnet.2007.04.006) ([preprint](https://www-complexnetworks.lip6.fr/~latapy/Publis/socnet07.pdf), [related code](https://www-complexnetworks.lip6.fr/~latapy/Bip/); _Social Networks_, 2008).
- [Fitting Large Signed Two-mode Blockmodels: Problems and Prospects](http://patrickdoreian.com/wp-content/uploads/2017/12/large-signed-2mode-networks_UNGA.pdf).
- [Generalized Blockmodeling of Two-mode Network Data](http://www.sciencedirect.com/science/article/pii/S0378873304000036) ([preprint](http://vlado.fmf.uni-lj.si/pub/networks/doc/preprint/TwoMode.pdf)).
- [Generalized Two-Mode Cores](http://www.sciencedirect.com/science/article/pii/S0378873315000271).
- [Generalized Blockmodeling of Two-mode Network Data](https://doi.org/10.1016/j.socnet.2004.01.002) ([preprint](http://vlado.fmf.uni-lj.si/pub/networks/doc/preprint/TwoMode.pdf)).
- [Generalized Two-Mode Cores](https://doi.org/10.1016/j.socnet.2015.04.001).
- [Partitioning Signed Two-Mode Networks](http://patrickdoreian.com/wp-content/uploads/2017/12/partitioning-signed-social-networks.pdf).
- [Working with Bipartite/Affiliation Network Data in R](https://solomonmessing.wordpress.com/2012/09/30/working-with-bipartiteaffiliation-network-data-in-r/) (2012).
@ -1001,14 +1001,14 @@ Thanks to [Robert J. Ackland](https://github.com/rjackland),
[Patrick Connolly](http://nodescription.net/),
[Michael Dorman](http://geobgu.xyz/),
[Colin Fay](https://colinfay.me/),
[Marc Flandreau](http://www.history.upenn.edu/people/faculty/marc-flandreau),
[Eiko Fried](http://eiko-fried.com/),
[Christopher Steven Marcum](http://www.chrismarcum.com/),
[Marc Flandreau](https://www.history.upenn.edu/people/faculty/marc-flandreau),
[Eiko Fried](https://eiko-fried.com/),
[Christopher Steven Marcum](https://cmarcum.github.io/),
[Wouter de Nooy](https://www.uva.nl/profiel/n/o/w.denooy/w.denooy.html),
[Katya Ognyanova](http://kateto.net/),
[Katya Ognyanova](https://kateto.net/),
[Rahul Padhy](https://github.com/rahul-38-26-0111-0003),
[Camille Roth](http://camille.roth.free.fr/),
[Camille Roth](https://camilleroth.github.io/),
[Claude S. Fischer](https://sociology.berkeley.edu/faculty/claude-s-fischer),
[Cosma Shalizi](http://www.stat.cmu.edu/~cshalizi/),
[Cosma Shalizi](https://www.stat.cmu.edu/~cshalizi/),
[Tom A.B. Snijders](https://www.stats.ox.ac.uk/~snijders/),
[Chris Watson](https://profiles.bu.edu/Christopher.Watson) and [Tim A. Wheeler](https://github.com/tawheeler), who helped locating some of the awesome resources featured in this list.